Each tutorial walks you through an end-to-end bioinformatics workflow using a real dataset — often one of my own published isolates. Copy the commands, watch the output, read the interpretation.
From raw Illumina reads to an annotated assembly of Stenotrophomonas maltophilia SVIA2 — six steps, with a simulated terminal, live QC chart, and a final comparative table.
Using ABRicate and CARD to catalogue AMR genes in a clinical isolate, and framing the results in the hospital's antibiogram.
Shotgun metagenomics for environmental samples — Kraken2, MetaBAT2, and the art of calling something a MAG.
ANI, pangenomes, and Roary: how to know when two organisms are the same thing wearing different names.
I write tutorials the way I would narrate a bench session to a graduate student standing next to me. Every step explains why, not just what. Where I've made bad choices, I say so. Where defaults will bite you, I mark them.